Publications
Sensorimotor integration enhances temperature stimulus processing.
Anderson, L.S., Costabile, J.D., Schwinn, S., Calderon, D., & Haesemeyer, M. (Jun 2025) PLOS Computational Biology 21(6): e1013134. DOI: 10.1371/journal.pcbi.1013134
Markov models bridge behavioral strategies and circuit principles facilitating thermoregulation.
Balakrishnan, K.A., Haesemeyer, M. (Mar 2025)
BioRxiv, 2025.03.17.643749
Vertebrate behavioral thermoregulation: knowledge and future directions.
Cutler, B., Haesemeyer, M. (May 2024).
Neurophotonics, 11, 033409.
The preoptic area and dorsal habenula jointly support homeostatic navigation in larval zebrafish.
Palieri, V., Paoli, E., Wu, Y. K., Haesemeyer, M., Grunwald Kadow, I. C., & Portugues, R. (Feb 2024)
Current Biology, 34(3), 489–504
Model discovery to link neural activity to behavioral tasks.
Costabile, J. D., Balakrishnan, K. A., Schwinn, S., & Haesemeyer, M. (Jun 2023).
eLife, 12, e83289.
SciTube Video of Model Explanation: https://youtu.be/ex2zu4moncg?feature=shared
Thermoregulation in fish.
Haesemeyer M. (Dec 2020).
Molecular and cellular endocrinology, 518, 110986.
Convergent Temperature Representations in Artificial and Biological Neural Networks.
Haesemeyer, M., Schier, A. F., & Engert, F. (Sep 2019).
Neuron, 103(6), 1123–1134.e6.
A Brain-wide Circuit Model of Heat-Evoked Swimming Behavior in Larval Zebrafish.
Haesemeyer, M., Robson, D. N., Li, J. M., Schier, A. F., & Engert, F. (May 2018).
Neuron, 98(4), 817–831.e6.
The structure and timescales of heat perception in larval zebrafish.
Haesemeyer, M., Robson, D. N., Li, J. M., Schier, A. F., & Engert, F. (Nov 2015).
Cell systems, 1(5), 338–348.
Datasets
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Code
https://github.com/haesemeyer/thermonavi_behaviorhttps://github.com/kaarthik-balakrishnan/thermonavigation-simulation
https://github.com/haesemeyer/thermonavi_stan
https://github.com/haesemeyer/thermonavi_imaging
Data
https://dandiarchive.org/dandiset/000707https://dandiarchive.org/dandiset/000708
https://dandiarchive.org/dandiset/000697
https://dandiarchive.org/dandiset/000698
https://dandiarchive.org/dandiset/000699
https://dandiarchive.org/dandiset/000700
https://dandiarchive.org/dandiset/000701
https://dandiarchive.org/dandiset/000702
https://dandiarchive.org/dandiset/000703
https://dandiarchive.org/dandiset/000704
https://dandiarchive.org/dandiset/000705
https://dandiarchive.org/dandiset/000706
https://dandiarchive.org/dandiset/001339
https://dandiarchive.org/dandiset/001337
https://doi.org/10.5281/zenodo.14902233
https://doi.org/10.5281/zenodo.14902292
https://doi.org/10.5281/zenodo.15028245
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Code
https://bitbucket.org/jcostabile/tracking
https://github.com/haesemeyer/ZebraTrack
https://github.com/haesemeyer/plaid_pubData
https://doi.org/10.48324/dandi.000888/0.241014.2127
https://doi.org/10.48324/dandi.000889/0.241014.2127
https://doi.org/10.48324/dandi.000485/0.241014.2127
https://doi.org/10.48324/dandi.000486/0.241014.2127
https://doi.org/10.5281/zenodo.13930780
https://doi.org/10.5281/zenodo.13935291
https://doi.org/10.5281/zenodo.13935648 -
Raw data
https://dandiarchive.org/dandiset/000235/0.230316.1600
https://dandiarchive.org/dandiset/000236/0.230316.2031
https://dandiarchive.org/dandiset/000237/0.230316.1655
https://dandiarchive.org/dandiset/000238/0.230316.1519
Processed data
https://doi.org/10.5281/zenodo.7737788
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